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[epic] Galaxy W4M MzTab_M lib | init issues

summary

  • create Excalidraw maps
    • software solutions, output format, processed objects
    • list format MZtab-M (JSON, XML, TSV, ...) - bilan
  • spec MZTab format (JSON ... TSV)
  • mapping
    • format 3 tables - mapping strategy (input for lib/utils)
    • pforest-v3 import

Spike

As a developer
I want to init BioHackathon tasks
So that we split the work into subtasks

Acceptance criteria

  • task 1.a - Macro idea of information hosted through the MZ-Tab format - support light schema #2
  • task 1.b - Easy access to examples of mzTab file - files samples, URL, NextCloud - @franck.giacomoni #3
  • task 2.a - Map overview of existing software solutions X<->MZTab - List (including converters) with info of loss and languages, to be put on the map #4
  • task 2.b - Knowledge of outputs from mzTab-M REST API to convert JSON2CSV - xx #5
  • task 3.a - Mapping MZtab-M → PForest-V3 - preferencial mapping strategy - @nils.paulhe #6
  • task 3.b - mapping MZtab-M → "W4M 3T format" (+XCMS) - preferencial mapping strategy - @melanie.petera #7
  • task 4 - Implementation definition - choice of implementation to work on during the remaining week
Edited by Nils Paulhe